dbCAN Logo

Cluster: HRGMv2_0389_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0389_2 HRGMv2_0389_2_116 117247 118908 + 2.A.81.1.2
pfam HRGMv2_0389_2 HRGMv2_0389_2_117 118922 120919 + FBPase_2
CAZyme HRGMv2_0389_2 HRGMv2_0389_2_118 121076 123577 + GH2
pfam HRGMv2_0389_2 HRGMv2_0389_2_119 123698 124252 - Ferritin | Rubrerythrin | RUBY_RBDX
TF HRGMv2_0389_2 HRGMv2_0389_2_120 124316 124738 - FUR
TC HRGMv2_0389_2 HRGMv2_0389_2_121 124926 126191 - 2.A.1.25.5
pfam HRGMv2_0389_2 HRGMv2_0389_2_122 126184 127503 - SpoIID
CAZyme HRGMv2_0389_2 HRGMv2_0389_2_123 127516 129897 - GT2
Gene ID: HRGMv2_0389_2_116
Type: TC
Location: 117247 - 118908 (+)
Gene ID: HRGMv2_0389_2_117
Type: pfam
Location: 118922 - 120919 (+)
Gene ID: HRGMv2_0389_2_118
Type: CAZyme
Location: 121076 - 123577 (+)
Gene ID: HRGMv2_0389_2_119
Type: pfam
Location: 123698 - 124252 (-)
Gene ID: HRGMv2_0389_2_120
Type: TF
Location: 124316 - 124738 (-)
Gene ID: HRGMv2_0389_2_121
Type: TC
Location: 124926 - 126191 (-)
Gene ID: HRGMv2_0389_2_122
Type: pfam
Location: 126184 - 127503 (-)
Gene ID: HRGMv2_0389_2_123
Type: CAZyme
Location: 127516 - 129897 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List