dbCAN Logo

Cluster: HRGMv2_0389_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0389_29 HRGMv2_0389_29_17 20538 23528 + 1.B.14.6.1
TC HRGMv2_0389_29 HRGMv2_0389_29_18 23535 25136 + 8.A.46.1.3
pfam HRGMv2_0389_29 HRGMv2_0389_29_19 25143 26264 + SusE
CAZyme HRGMv2_0389_29 HRGMv2_0389_29_20 26498 27703 + GH76
CAZyme HRGMv2_0389_29 HRGMv2_0389_29_21 27708 28889 + GH76
CAZyme HRGMv2_0389_29 HRGMv2_0389_29_22 28894 31281 + GH92
TC HRGMv2_0389_29 HRGMv2_0389_29_23 31399 31827 + 2.A.1.7.16
Gene ID: HRGMv2_0389_29_17
Type: TC
Location: 20538 - 23528 (+)
Gene ID: HRGMv2_0389_29_18
Type: TC
Location: 23535 - 25136 (+)
Gene ID: HRGMv2_0389_29_19
Type: pfam
Location: 25143 - 26264 (+)
Gene ID: HRGMv2_0389_29_20
Type: CAZyme
Location: 26498 - 27703 (+)
Gene ID: HRGMv2_0389_29_21
Type: CAZyme
Location: 27708 - 28889 (+)
Gene ID: HRGMv2_0389_29_22
Type: CAZyme
Location: 28894 - 31281 (+)
Gene ID: HRGMv2_0389_29_23
Type: TC
Location: 31399 - 31827 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List