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Cluster: HRGMv2_0389_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0389_20 HRGMv2_0389_20_32 43896 46988 - 1.B.14.6.1
TC HRGMv2_0389_20 HRGMv2_0389_20_33 47165 48622 - 2.A.1.14.25
pfam HRGMv2_0389_20 HRGMv2_0389_20_34 48716 49636 - KduI
CAZyme HRGMv2_0389_20 HRGMv2_0389_20_35 50021 52306 - GH92
CAZyme HRGMv2_0389_20 HRGMv2_0389_20_36 52322 54601 - GH92
STP HRGMv2_0389_20 HRGMv2_0389_20_37 54643 55638 - FecR
CAZyme HRGMv2_0389_20 HRGMv2_0389_20_38 55779 57995 - GH92
TC HRGMv2_0389_20 HRGMv2_0389_20_39 58243 60051 - 8.A.46.2.1
TC HRGMv2_0389_20 HRGMv2_0389_20_40 60073 63504 - 1.B.14.6.2
Gene ID: HRGMv2_0389_20_32
Type: TC
Location: 43896 - 46988 (-)
Gene ID: HRGMv2_0389_20_33
Type: TC
Location: 47165 - 48622 (-)
Gene ID: HRGMv2_0389_20_34
Type: pfam
Location: 48716 - 49636 (-)
Gene ID: HRGMv2_0389_20_35
Type: CAZyme
Location: 50021 - 52306 (-)
Gene ID: HRGMv2_0389_20_36
Type: CAZyme
Location: 52322 - 54601 (-)
Gene ID: HRGMv2_0389_20_37
Type: STP
Location: 54643 - 55638 (-)
Gene ID: HRGMv2_0389_20_38
Type: CAZyme
Location: 55779 - 57995 (-)
Gene ID: HRGMv2_0389_20_39
Type: TC
Location: 58243 - 60051 (-)
Gene ID: HRGMv2_0389_20_40
Type: TC
Location: 60073 - 63504 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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