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Cluster: HRGMv2_0389_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0389_11 HRGMv2_0389_11_34 39517 42213 - 1.B.14.6.2
peptidase HRGMv2_0389_11 HRGMv2_0389_11_35 42467 42757 + S09.UPW
TC HRGMv2_0389_11 HRGMv2_0389_11_36 43281 45875 + 3.A.24.1.1
TC HRGMv2_0389_11 HRGMv2_0389_11_37 45897 47054 - 9.B.97.1.2
TC HRGMv2_0389_11 HRGMv2_0389_11_38 47144 48763 - 3.A.1.121.4
pfam HRGMv2_0389_11 HRGMv2_0389_11_39 48882 49391 - ECF_trnsprt
TC HRGMv2_0389_11 HRGMv2_0389_11_40 49404 51311 - 1.B.14.3.1
NULL(UNKNOWN) HRGMv2_0389_11 HRGMv2_0389_11_41 51714 51884 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0389_11 HRGMv2_0389_11_42 51980 54193 - GH20
Gene ID: HRGMv2_0389_11_34
Type: TC
Location: 39517 - 42213 (-)
Gene ID: HRGMv2_0389_11_35
Type: peptidase
Location: 42467 - 42757 (+)
Gene ID: HRGMv2_0389_11_36
Type: TC
Location: 43281 - 45875 (+)
Gene ID: HRGMv2_0389_11_37
Type: TC
Location: 45897 - 47054 (-)
Gene ID: HRGMv2_0389_11_38
Type: TC
Location: 47144 - 48763 (-)
Gene ID: HRGMv2_0389_11_39
Type: pfam
Location: 48882 - 49391 (-)
Gene ID: HRGMv2_0389_11_40
Type: TC
Location: 49404 - 51311 (-)
Gene ID: HRGMv2_0389_11_41
Type:
Location: 51714 - 51884 (+)
Gene ID: HRGMv2_0389_11_42
Type: CAZyme
Location: 51980 - 54193 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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