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Cluster: HRGMv2_0389_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0389_9 HRGMv2_0389_9_73 98106 98945 - CE1
pfam HRGMv2_0389_9 HRGMv2_0389_9_74 99023 100627 - MFS_1
TC HRGMv2_0389_9 HRGMv2_0389_9_75 100624 101688 - 2.A.1.3.36
pfam HRGMv2_0389_9 HRGMv2_0389_9_76 101719 103035 - OEP | OEP
TF HRGMv2_0389_9 HRGMv2_0389_9_77 103028 103468 - MarR
TC HRGMv2_0389_9 HRGMv2_0389_9_78 104084 107131 + 1.B.14.6.13
TC HRGMv2_0389_9 HRGMv2_0389_9_79 107153 108796 + 8.A.46.2.2
CAZyme HRGMv2_0389_9 HRGMv2_0389_9_80 108830 109924 + GH18
Gene ID: HRGMv2_0389_9_73
Type: CAZyme
Location: 98106 - 98945 (-)
Gene ID: HRGMv2_0389_9_74
Type: pfam
Location: 99023 - 100627 (-)
Gene ID: HRGMv2_0389_9_75
Type: TC
Location: 100624 - 101688 (-)
Gene ID: HRGMv2_0389_9_76
Type: pfam
Location: 101719 - 103035 (-)
Gene ID: HRGMv2_0389_9_77
Type: TF
Location: 103028 - 103468 (-)
Gene ID: HRGMv2_0389_9_78
Type: TC
Location: 104084 - 107131 (+)
Gene ID: HRGMv2_0389_9_79
Type: TC
Location: 107153 - 108796 (+)
Gene ID: HRGMv2_0389_9_80
Type: CAZyme
Location: 108830 - 109924 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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