dbCAN HGM

Cluster: HRGMv2_0389_CGC22

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0389_7	HRGMv2_0389_7_1	3	872	+	GH125
TC	HRGMv2_0389_7	HRGMv2_0389_7_2	943	4062	+	1.B.14.6.1
TC	HRGMv2_0389_7	HRGMv2_0389_7_3	4075	5694	+	8.A.46.1.3
pfam	HRGMv2_0389_7	HRGMv2_0389_7_4	5717	6874	+	SusE
CAZyme	HRGMv2_0389_7	HRGMv2_0389_7_5	6882	8003	+	GH76
CAZyme	HRGMv2_0389_7	HRGMv2_0389_7_6	8552	11389	+	GH106
pfam	HRGMv2_0389_7	HRGMv2_0389_7_7	11493	12185	+	Lipase_GDSL \| Lipase_GDSL_2
CAZyme	HRGMv2_0389_7	HRGMv2_0389_7_8	12222	14366	+	GH92
CAZyme	HRGMv2_0389_7	HRGMv2_0389_7_9	14391	15572	+	GH76

Gene ID: HRGMv2_0389_7_1
Type: CAZyme
Location: 3 - 872 (+)

Gene ID: HRGMv2_0389_7_2
Type: TC
Location: 943 - 4062 (+)

Gene ID: HRGMv2_0389_7_3
Type: TC
Location: 4075 - 5694 (+)

Gene ID: HRGMv2_0389_7_4
Type: pfam
Location: 5717 - 6874 (+)

Gene ID: HRGMv2_0389_7_5
Type: CAZyme
Location: 6882 - 8003 (+)

Gene ID: HRGMv2_0389_7_6
Type: CAZyme
Location: 8552 - 11389 (+)

Gene ID: HRGMv2_0389_7_7
Type: pfam
Location: 11493 - 12185 (+)

Gene ID: HRGMv2_0389_7_8
Type: CAZyme
Location: 12222 - 14366 (+)

Gene ID: HRGMv2_0389_7_9
Type: CAZyme
Location: 14391 - 15572 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0389_7_1	vegan > omnivore	1.46590	0.01878
HRGMv2_0389_7_1	vegetarian > omnivore	1.65291	0.01557
HRGMv2_0389_7_2	vegetarian > vegan	1.16902	0.04443
HRGMv2_0389_7_3	vegetarian > omnivore	1.49221	0.04197
HRGMv2_0389_7_3	vegetarian > vegan	1.50712	0.04443
HRGMv2_0389_7_4	vegetarian > vegan	1.01835	0.04443
HRGMv2_0389_7_5	vegetarian > vegan	1.29369	0.04443
HRGMv2_0389_7_7	vegetarian > vegan	1.14365	0.04443