Cluster: HRGMv2_0389_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0389
- CGC Family ID: CGCFAM_02066
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0389_6 | HRGMv2_0389_6_80 | 99424 | 100026 | + | 1.B.44.2.11 |
| NULL(UNKNOWN) | HRGMv2_0389_6 | HRGMv2_0389_6_81 | 100291 | 100482 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0389_6 | HRGMv2_0389_6_82 | 100507 | 101304 | + | Metallophos |
| CAZyme | HRGMv2_0389_6 | HRGMv2_0389_6_83 | 101301 | 102416 | + | GT1 |
Gene ID: HRGMv2_0389_6_80
Type: TC
Location: 99424 - 100026 (+)
Type: TC
Location: 99424 - 100026 (+)
Gene ID: HRGMv2_0389_6_81
Type:
Location: 100291 - 100482 (+)
Type:
Location: 100291 - 100482 (+)
Gene ID: HRGMv2_0389_6_82
Type: pfam
Location: 100507 - 101304 (+)
Type: pfam
Location: 100507 - 101304 (+)
Gene ID: HRGMv2_0389_6_83
Type: CAZyme
Location: 101301 - 102416 (+)
Type: CAZyme
Location: 101301 - 102416 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.