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Cluster: HRGMv2_0389_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0389_5 HRGMv2_0389_5_15 15348 16580 + 2.A.1.14.14
pfam HRGMv2_0389_5 HRGMv2_0389_5_16 16607 17053 + DUF386
CAZyme HRGMv2_0389_5 HRGMv2_0389_5_17 17069 18697 + CBM93 | GH33
NULL(UNKNOWN) HRGMv2_0389_5 HRGMv2_0389_5_18 18971 19132 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0389_5 HRGMv2_0389_5_19 19379 22744 + 1.B.14.6.1
TC HRGMv2_0389_5 HRGMv2_0389_5_20 22761 24326 + 8.A.46.1.4
sulfatase HRGMv2_0389_5 HRGMv2_0389_5_21 24408 25070 + S1_16
CAZyme HRGMv2_0389_5 HRGMv2_0389_5_22 25073 27142 + CE20
pfam HRGMv2_0389_5 HRGMv2_0389_5_23 27400 28278 + EamA | EamA
TC HRGMv2_0389_5 HRGMv2_0389_5_24 28472 28828 - 9.B.124.1.3
Gene ID: HRGMv2_0389_5_15
Type: TC
Location: 15348 - 16580 (+)
Gene ID: HRGMv2_0389_5_16
Type: pfam
Location: 16607 - 17053 (+)
Gene ID: HRGMv2_0389_5_17
Type: CAZyme
Location: 17069 - 18697 (+)
Gene ID: HRGMv2_0389_5_18
Type:
Location: 18971 - 19132 (-)
Gene ID: HRGMv2_0389_5_19
Type: TC
Location: 19379 - 22744 (+)
Gene ID: HRGMv2_0389_5_20
Type: TC
Location: 22761 - 24326 (+)
Gene ID: HRGMv2_0389_5_21
Type: sulfatase
Location: 24408 - 25070 (+)
Gene ID: HRGMv2_0389_5_22
Type: CAZyme
Location: 25073 - 27142 (+)
Gene ID: HRGMv2_0389_5_23
Type: pfam
Location: 27400 - 28278 (+)
Gene ID: HRGMv2_0389_5_24
Type: TC
Location: 28472 - 28828 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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