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Cluster: HRGMv2_0383_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0383_11 HRGMv2_0383_11_36 33811 35157 + 1.B.3.1.7
peptidase HRGMv2_0383_11 HRGMv2_0383_11_37 35205 36476 + M75.UPW
pfam HRGMv2_0383_11 HRGMv2_0383_11_38 36579 38255 + DHOR
TC HRGMv2_0383_11 HRGMv2_0383_11_39 38378 40588 + 9.B.14.3.1
pfam HRGMv2_0383_11 HRGMv2_0383_11_40 40707 41876 - ATP-grasp | CPSase_L_D2 | Dala_Dala_lig_C | PurT_C | RS_preATP-grasp-like
TF HRGMv2_0383_11 HRGMv2_0383_11_41 41992 46236 - HTH_AraC
CAZyme HRGMv2_0383_11 HRGMv2_0383_11_42 46332 48926 - GH3
pfam HRGMv2_0383_11 HRGMv2_0383_11_43 49024 51804 - UvrA_DNA-bind | UvrA_inter
TC HRGMv2_0383_11 HRGMv2_0383_11_44 51898 53208 - 2.A.66.1.4
Gene ID: HRGMv2_0383_11_36
Type: TC
Location: 33811 - 35157 (+)
Gene ID: HRGMv2_0383_11_37
Type: peptidase
Location: 35205 - 36476 (+)
Gene ID: HRGMv2_0383_11_38
Type: pfam
Location: 36579 - 38255 (+)
Gene ID: HRGMv2_0383_11_39
Type: TC
Location: 38378 - 40588 (+)
Gene ID: HRGMv2_0383_11_40
Type: pfam
Location: 40707 - 41876 (-)
Gene ID: HRGMv2_0383_11_41
Type: TF
Location: 41992 - 46236 (-)
Gene ID: HRGMv2_0383_11_42
Type: CAZyme
Location: 46332 - 48926 (-)
Gene ID: HRGMv2_0383_11_43
Type: pfam
Location: 49024 - 51804 (-)
Gene ID: HRGMv2_0383_11_44
Type: TC
Location: 51898 - 53208 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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