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Cluster: HRGMv2_0383_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0383_92 HRGMv2_0383_92_2 1716 4196 + 9.A.8.1.6
pfam HRGMv2_0383_92 HRGMv2_0383_92_3 4291 4455 + FeoB_associated
NULL(UNKNOWN) HRGMv2_0383_92 HRGMv2_0383_92_4 4553 5167 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0383_92 HRGMv2_0383_92_5 5923 9231 + 1.B.14.6.2
pfam HRGMv2_0383_92 HRGMv2_0383_92_6 9258 10649 + SusD-like | SusD-like | SusD-like_2 | SusD-like_3
CAZyme HRGMv2_0383_92 HRGMv2_0383_92_7 10677 11567 + CE1
NULL(UNKNOWN) HRGMv2_0383_92 HRGMv2_0383_92_8 11608 12120 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0383_92 HRGMv2_0383_92_9 12651 13910 + GH105
Gene ID: HRGMv2_0383_92_2
Type: TC
Location: 1716 - 4196 (+)
Gene ID: HRGMv2_0383_92_3
Type: pfam
Location: 4291 - 4455 (+)
Gene ID: HRGMv2_0383_92_4
Type:
Location: 4553 - 5167 (+)
Gene ID: HRGMv2_0383_92_5
Type: TC
Location: 5923 - 9231 (+)
Gene ID: HRGMv2_0383_92_6
Type: pfam
Location: 9258 - 10649 (+)
Gene ID: HRGMv2_0383_92_7
Type: CAZyme
Location: 10677 - 11567 (+)
Gene ID: HRGMv2_0383_92_8
Type:
Location: 11608 - 12120 (+)
Gene ID: HRGMv2_0383_92_9
Type: CAZyme
Location: 12651 - 13910 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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