dbCAN Logo

Cluster: HRGMv2_0383_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0383_82 HRGMv2_0383_82_3 3162 4130 + 1.A.34.1.3
TF HRGMv2_0383_82 HRGMv2_0383_82_4 4156 4503 + MerR
STP HRGMv2_0383_82 HRGMv2_0383_82_5 4562 6835 - HD
CAZyme HRGMv2_0383_82 HRGMv2_0383_82_6 6915 8156 - GH23
pfam HRGMv2_0383_82 HRGMv2_0383_82_7 8163 8957 - DUF5683
pfam HRGMv2_0383_82 HRGMv2_0383_82_8 8970 9869 - ParBc | HTH_ParB | ParB_dimer
TC HRGMv2_0383_82 HRGMv2_0383_82_9 9897 10667 - 8.A.3.2.3
pfam HRGMv2_0383_82 HRGMv2_0383_82_10 11045 11818 + SurE
CAZyme HRGMv2_0383_82 HRGMv2_0383_82_11 11815 12966 + GT19
pfam HRGMv2_0383_82 HRGMv2_0383_82_12 12955 13794 - CTP_transf_1
TC HRGMv2_0383_82 HRGMv2_0383_82_13 13952 16018 - 3.A.16.1.1
Gene ID: HRGMv2_0383_82_3
Type: TC
Location: 3162 - 4130 (+)
Gene ID: HRGMv2_0383_82_4
Type: TF
Location: 4156 - 4503 (+)
Gene ID: HRGMv2_0383_82_5
Type: STP
Location: 4562 - 6835 (-)
Gene ID: HRGMv2_0383_82_6
Type: CAZyme
Location: 6915 - 8156 (-)
Gene ID: HRGMv2_0383_82_7
Type: pfam
Location: 8163 - 8957 (-)
Gene ID: HRGMv2_0383_82_8
Type: pfam
Location: 8970 - 9869 (-)
Gene ID: HRGMv2_0383_82_9
Type: TC
Location: 9897 - 10667 (-)
Gene ID: HRGMv2_0383_82_10
Type: pfam
Location: 11045 - 11818 (+)
Gene ID: HRGMv2_0383_82_11
Type: CAZyme
Location: 11815 - 12966 (+)
Gene ID: HRGMv2_0383_82_12
Type: pfam
Location: 12955 - 13794 (-)
Gene ID: HRGMv2_0383_82_13
Type: TC
Location: 13952 - 16018 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List