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Cluster: HRGMv2_0383_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0383_69 HRGMv2_0383_69_3 2750 4528 - GH5_4
NULL(UNKNOWN) HRGMv2_0383_69 HRGMv2_0383_69_4 4610 6415 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0383_69 HRGMv2_0383_69_5 6528 8249 - SusD_RagB | SusD-like_3
TC HRGMv2_0383_69 HRGMv2_0383_69_6 8274 11450 - 1.B.14.6.1
pfam HRGMv2_0383_69 HRGMv2_0383_69_7 11743 12498 - Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_0383_69 HRGMv2_0383_69_8 12695 14257 + CBM91 | GH43_12
CAZyme HRGMv2_0383_69 HRGMv2_0383_69_9 14254 17268 + GH95
CAZyme HRGMv2_0383_69 HRGMv2_0383_69_10 17541 19889 + GH3
Gene ID: HRGMv2_0383_69_3
Type: CAZyme
Location: 2750 - 4528 (-)
Gene ID: HRGMv2_0383_69_4
Type:
Location: 4610 - 6415 (-)
Gene ID: HRGMv2_0383_69_5
Type: pfam
Location: 6528 - 8249 (-)
Gene ID: HRGMv2_0383_69_6
Type: TC
Location: 8274 - 11450 (-)
Gene ID: HRGMv2_0383_69_7
Type: pfam
Location: 11743 - 12498 (-)
Gene ID: HRGMv2_0383_69_8
Type: CAZyme
Location: 12695 - 14257 (+)
Gene ID: HRGMv2_0383_69_9
Type: CAZyme
Location: 14254 - 17268 (+)
Gene ID: HRGMv2_0383_69_10
Type: CAZyme
Location: 17541 - 19889 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0383_69_10 vegan > omnivore 1.17044 0.02258

🧭 Explore Read Mapping of CGC

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