Cluster: HRGMv2_0383_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0383
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0383_50 | HRGMv2_0383_50_1 | 202 | 2109 | + | GH146 |
| NULL(UNKNOWN) | HRGMv2_0383_50 | HRGMv2_0383_50_2 | 2135 | 2257 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | HRGMv2_0383_50 | HRGMv2_0383_50_3 | 2489 | 3724 | - | S1_27 |
| CAZyme | HRGMv2_0383_50 | HRGMv2_0383_50_4 | 3892 | 5829 | + | GH97 |
| CAZyme | HRGMv2_0383_50 | HRGMv2_0383_50_5 | 5849 | 7066 | + | GH88 |
| STP | HRGMv2_0383_50 | HRGMv2_0383_50_6 | 7374 | 9869 | - | HATPase_c | HisKA | Response_reg |
| TC | HRGMv2_0383_50 | HRGMv2_0383_50_7 | 10037 | 11371 | - | 2.A.66.1.2 |
Gene ID: HRGMv2_0383_50_1
Type: CAZyme
Location: 202 - 2109 (+)
Type: CAZyme
Location: 202 - 2109 (+)
Gene ID: HRGMv2_0383_50_2
Type:
Location: 2135 - 2257 (+)
Type:
Location: 2135 - 2257 (+)
Gene ID: HRGMv2_0383_50_3
Type: sulfatase
Location: 2489 - 3724 (-)
Type: sulfatase
Location: 2489 - 3724 (-)
Gene ID: HRGMv2_0383_50_4
Type: CAZyme
Location: 3892 - 5829 (+)
Type: CAZyme
Location: 3892 - 5829 (+)
Gene ID: HRGMv2_0383_50_5
Type: CAZyme
Location: 5849 - 7066 (+)
Type: CAZyme
Location: 5849 - 7066 (+)
Gene ID: HRGMv2_0383_50_6
Type: STP
Location: 7374 - 9869 (-)
Type: STP
Location: 7374 - 9869 (-)
Gene ID: HRGMv2_0383_50_7
Type: TC
Location: 10037 - 11371 (-)
Type: TC
Location: 10037 - 11371 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola caecigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.