dbCAN Logo

Cluster: HRGMv2_0383_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0383_45 HRGMv2_0383_45_3 5588 8620 - 2.A.6.2.33
TC HRGMv2_0383_45 HRGMv2_0383_45_4 8636 9712 - 2.A.6.2.28
CAZyme HRGMv2_0383_45 HRGMv2_0383_45_5 10054 11709 + CE20 | CE20
TC HRGMv2_0383_45 HRGMv2_0383_45_6 11789 13282 + 2.A.2.3.4
CAZyme HRGMv2_0383_45 HRGMv2_0383_45_7 13530 14666 + GH10
CAZyme HRGMv2_0383_45 HRGMv2_0383_45_8 14717 15691 + GH43_1
CAZyme HRGMv2_0383_45 HRGMv2_0383_45_9 15688 17700 + GH67
Gene ID: HRGMv2_0383_45_3
Type: TC
Location: 5588 - 8620 (-)
Gene ID: HRGMv2_0383_45_4
Type: TC
Location: 8636 - 9712 (-)
Gene ID: HRGMv2_0383_45_5
Type: CAZyme
Location: 10054 - 11709 (+)
Gene ID: HRGMv2_0383_45_6
Type: TC
Location: 11789 - 13282 (+)
Gene ID: HRGMv2_0383_45_7
Type: CAZyme
Location: 13530 - 14666 (+)
Gene ID: HRGMv2_0383_45_8
Type: CAZyme
Location: 14717 - 15691 (+)
Gene ID: HRGMv2_0383_45_9
Type: CAZyme
Location: 15688 - 17700 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0383_45_8 vegan > omnivore 1.14371 0.03159

🧭 Explore Read Mapping of CGC

← Back to Cluster List