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Cluster: HRGMv2_0383_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0383_39 HRGMv2_0383_39_19 19604 21562 + GT51
STP HRGMv2_0383_39 HRGMv2_0383_39_20 21884 22858 - Glucokinase
TC HRGMv2_0383_39 HRGMv2_0383_39_21 23019 23738 + 3.A.1.122.2
TC HRGMv2_0383_39 HRGMv2_0383_39_22 23747 24997 + 3.A.1.122.2
TC HRGMv2_0383_39 HRGMv2_0383_39_23 25025 26269 + 3.A.1.122.2
pfam HRGMv2_0383_39 HRGMv2_0383_39_24 26412 27512 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC HRGMv2_0383_39 HRGMv2_0383_39_25 27525 28847 + 2.A.6.2.25
Gene ID: HRGMv2_0383_39_19
Type: CAZyme
Location: 19604 - 21562 (+)
Gene ID: HRGMv2_0383_39_20
Type: STP
Location: 21884 - 22858 (-)
Gene ID: HRGMv2_0383_39_21
Type: TC
Location: 23019 - 23738 (+)
Gene ID: HRGMv2_0383_39_22
Type: TC
Location: 23747 - 24997 (+)
Gene ID: HRGMv2_0383_39_23
Type: TC
Location: 25025 - 26269 (+)
Gene ID: HRGMv2_0383_39_24
Type: pfam
Location: 26412 - 27512 (+)
Gene ID: HRGMv2_0383_39_25
Type: TC
Location: 27525 - 28847 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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