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Cluster: HRGMv2_0383_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0383_26 HRGMv2_0383_26_3 3116 4471 - 2.A.66.1.33
TF HRGMv2_0383_26 HRGMv2_0383_26_4 4607 7546 + HTH_AraC
CAZyme HRGMv2_0383_26 HRGMv2_0383_26_5 7666 10125 + GH31_4
pfam HRGMv2_0383_26 HRGMv2_0383_26_6 10515 11549 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd
TC HRGMv2_0383_26 HRGMv2_0383_26_7 12220 13641 - 3.D.9.1.1
TC HRGMv2_0383_26 HRGMv2_0383_26_8 13652 15133 - 3.D.1.2.1
TC HRGMv2_0383_26 HRGMv2_0383_26_9 15130 17022 - 3.D.9.1.1
TC HRGMv2_0383_26 HRGMv2_0383_26_10 17041 17352 - 3.D.1.2.1
TC HRGMv2_0383_26 HRGMv2_0383_26_11 17369 17887 - 3.D.9.1.1
STP HRGMv2_0383_26 HRGMv2_0383_26_12 17900 18367 - Fer4 | Fer4
TC HRGMv2_0383_26 HRGMv2_0383_26_13 18380 19480 - 3.D.1.5.1
TC HRGMv2_0383_26 HRGMv2_0383_26_14 19535 21154 - 3.D.1.5.1
TC HRGMv2_0383_26 HRGMv2_0383_26_15 21151 21747 - 3.D.1.3.1
TC HRGMv2_0383_26 HRGMv2_0383_26_16 21768 22118 - 3.D.1.8.1
Gene ID: HRGMv2_0383_26_3
Type: TC
Location: 3116 - 4471 (-)
Gene ID: HRGMv2_0383_26_4
Type: TF
Location: 4607 - 7546 (+)
Gene ID: HRGMv2_0383_26_5
Type: CAZyme
Location: 7666 - 10125 (+)
Gene ID: HRGMv2_0383_26_6
Type: pfam
Location: 10515 - 11549 (-)
Gene ID: HRGMv2_0383_26_7
Type: TC
Location: 12220 - 13641 (-)
Gene ID: HRGMv2_0383_26_8
Type: TC
Location: 13652 - 15133 (-)
Gene ID: HRGMv2_0383_26_9
Type: TC
Location: 15130 - 17022 (-)
Gene ID: HRGMv2_0383_26_10
Type: TC
Location: 17041 - 17352 (-)
Gene ID: HRGMv2_0383_26_11
Type: TC
Location: 17369 - 17887 (-)
Gene ID: HRGMv2_0383_26_12
Type: STP
Location: 17900 - 18367 (-)
Gene ID: HRGMv2_0383_26_13
Type: TC
Location: 18380 - 19480 (-)
Gene ID: HRGMv2_0383_26_14
Type: TC
Location: 19535 - 21154 (-)
Gene ID: HRGMv2_0383_26_15
Type: TC
Location: 21151 - 21747 (-)
Gene ID: HRGMv2_0383_26_16
Type: TC
Location: 21768 - 22118 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0383_26_7 vegetarian > vegan 1.05898 0.04449

🧭 Explore Read Mapping of CGC

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