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Cluster: HRGMv2_0381_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0381_52 HRGMv2_0381_52_1 75 677 + 2.A.2.6.3
TC HRGMv2_0381_52 HRGMv2_0381_52_2 715 3657 + 1.B.14.6.1
pfam HRGMv2_0381_52 HRGMv2_0381_52_3 3676 5466 + SusD_RagB
NULL(UNKNOWN) HRGMv2_0381_52 HRGMv2_0381_52_4 5480 8224 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0381_52 HRGMv2_0381_52_5 8245 9579 + GH13
CAZyme HRGMv2_0381_52 HRGMv2_0381_52_6 9586 10899 + GH13
CAZyme HRGMv2_0381_52 HRGMv2_0381_52_7 10985 12934 + GH13_46
CAZyme HRGMv2_0381_52 HRGMv2_0381_52_8 12927 15119 + GH97
CAZyme HRGMv2_0381_52 HRGMv2_0381_52_9 15218 17851 + GH77
Gene ID: HRGMv2_0381_52_1
Type: TC
Location: 75 - 677 (+)
Gene ID: HRGMv2_0381_52_2
Type: TC
Location: 715 - 3657 (+)
Gene ID: HRGMv2_0381_52_3
Type: pfam
Location: 3676 - 5466 (+)
Gene ID: HRGMv2_0381_52_4
Type:
Location: 5480 - 8224 (+)
Gene ID: HRGMv2_0381_52_5
Type: CAZyme
Location: 8245 - 9579 (+)
Gene ID: HRGMv2_0381_52_6
Type: CAZyme
Location: 9586 - 10899 (+)
Gene ID: HRGMv2_0381_52_7
Type: CAZyme
Location: 10985 - 12934 (+)
Gene ID: HRGMv2_0381_52_8
Type: CAZyme
Location: 12927 - 15119 (+)
Gene ID: HRGMv2_0381_52_9
Type: CAZyme
Location: 15218 - 17851 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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