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Cluster: HRGMv2_0381_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0381_1 HRGMv2_0381_1_20 31244 34375 + 1.B.14.6.1
TC HRGMv2_0381_1 HRGMv2_0381_1_21 34389 35972 + 8.A.46.1.3
NULL(UNKNOWN) HRGMv2_0381_1 HRGMv2_0381_1_22 36001 37146 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0381_1 HRGMv2_0381_1_23 37143 39011 + GH110
CAZyme HRGMv2_0381_1 HRGMv2_0381_1_24 39001 40938 + GH110
peptidase HRGMv2_0381_1 HRGMv2_0381_1_25 40925 41869 + S09.B04
NULL(UNKNOWN) HRGMv2_0381_1 HRGMv2_0381_1_26 41968 44028 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0381_1 HRGMv2_0381_1_27 44042 45784 + GH110
Gene ID: HRGMv2_0381_1_20
Type: TC
Location: 31244 - 34375 (+)
Gene ID: HRGMv2_0381_1_21
Type: TC
Location: 34389 - 35972 (+)
Gene ID: HRGMv2_0381_1_22
Type:
Location: 36001 - 37146 (+)
Gene ID: HRGMv2_0381_1_23
Type: CAZyme
Location: 37143 - 39011 (+)
Gene ID: HRGMv2_0381_1_24
Type: CAZyme
Location: 39001 - 40938 (+)
Gene ID: HRGMv2_0381_1_25
Type: peptidase
Location: 40925 - 41869 (+)
Gene ID: HRGMv2_0381_1_26
Type:
Location: 41968 - 44028 (+)
Gene ID: HRGMv2_0381_1_27
Type: CAZyme
Location: 44042 - 45784 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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