dbCAN Logo

Cluster: HRGMv2_0380_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0380_3 HRGMv2_0380_3_85 96461 98452 + GH97
NULL(UNKNOWN) HRGMv2_0380_3 HRGMv2_0380_3_86 98680 98973 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0380_3 HRGMv2_0380_3_87 99027 102170 - 2.A.6.3.6
TC HRGMv2_0380_3 HRGMv2_0380_3_88 102183 103178 - 2.A.6.2.25
TC HRGMv2_0380_3 HRGMv2_0380_3_89 103231 104550 - 1.B.17.2.10
STP HRGMv2_0380_3 HRGMv2_0380_3_90 104578 105975 - TetR_N
TC HRGMv2_0380_3 HRGMv2_0380_3_91 106164 107030 - 2.A.1.1.120
pfam HRGMv2_0380_3 HRGMv2_0380_3_92 107558 107827 + ROK
TC HRGMv2_0380_3 HRGMv2_0380_3_93 107899 109587 - 2.A.17.1.6
CAZyme HRGMv2_0380_3 HRGMv2_0380_3_94 109829 111874 + GH13_8
Gene ID: HRGMv2_0380_3_85
Type: CAZyme
Location: 96461 - 98452 (+)
Gene ID: HRGMv2_0380_3_86
Type:
Location: 98680 - 98973 (-)
Gene ID: HRGMv2_0380_3_87
Type: TC
Location: 99027 - 102170 (-)
Gene ID: HRGMv2_0380_3_88
Type: TC
Location: 102183 - 103178 (-)
Gene ID: HRGMv2_0380_3_89
Type: TC
Location: 103231 - 104550 (-)
Gene ID: HRGMv2_0380_3_90
Type: STP
Location: 104578 - 105975 (-)
Gene ID: HRGMv2_0380_3_91
Type: TC
Location: 106164 - 107030 (-)
Gene ID: HRGMv2_0380_3_92
Type: pfam
Location: 107558 - 107827 (+)
Gene ID: HRGMv2_0380_3_93
Type: TC
Location: 107899 - 109587 (-)
Gene ID: HRGMv2_0380_3_94
Type: CAZyme
Location: 109829 - 111874 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List