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Cluster: HRGMv2_0380_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0380_2 HRGMv2_0380_2_32 36894 40046 + 1.B.14.6.1
TC HRGMv2_0380_2 HRGMv2_0380_2_33 40091 41575 + 8.A.46.1.5
pfam HRGMv2_0380_2 HRGMv2_0380_2_34 41595 43289 + TIG
pfam HRGMv2_0380_2 HRGMv2_0380_2_35 43308 45233 + TIG
CAZyme HRGMv2_0380_2 HRGMv2_0380_2_36 45360 46748 + PL6
CAZyme HRGMv2_0380_2 HRGMv2_0380_2_37 46763 49024 + PL6 | PL6_1
CAZyme HRGMv2_0380_2 HRGMv2_0380_2_38 49029 51236 + PL17_2 | PL17_2
pfam HRGMv2_0380_2 HRGMv2_0380_2_39 51273 51617 + Cupin_2
TC HRGMv2_0380_2 HRGMv2_0380_2_40 51637 53088 + 2.A.1.14.25
pfam HRGMv2_0380_2 HRGMv2_0380_2_41 53190 53942 + adh_short | KR | adh_short_C2 | SDR
CAZyme HRGMv2_0380_2 HRGMv2_0380_2_42 54045 55202 + PL38
CAZyme HRGMv2_0380_2 HRGMv2_0380_2_43 55279 56700 - CE20
Gene ID: HRGMv2_0380_2_32
Type: TC
Location: 36894 - 40046 (+)
Gene ID: HRGMv2_0380_2_33
Type: TC
Location: 40091 - 41575 (+)
Gene ID: HRGMv2_0380_2_34
Type: pfam
Location: 41595 - 43289 (+)
Gene ID: HRGMv2_0380_2_35
Type: pfam
Location: 43308 - 45233 (+)
Gene ID: HRGMv2_0380_2_36
Type: CAZyme
Location: 45360 - 46748 (+)
Gene ID: HRGMv2_0380_2_37
Type: CAZyme
Location: 46763 - 49024 (+)
Gene ID: HRGMv2_0380_2_38
Type: CAZyme
Location: 49029 - 51236 (+)
Gene ID: HRGMv2_0380_2_39
Type: pfam
Location: 51273 - 51617 (+)
Gene ID: HRGMv2_0380_2_40
Type: TC
Location: 51637 - 53088 (+)
Gene ID: HRGMv2_0380_2_41
Type: pfam
Location: 53190 - 53942 (+)
Gene ID: HRGMv2_0380_2_42
Type: CAZyme
Location: 54045 - 55202 (+)
Gene ID: HRGMv2_0380_2_43
Type: CAZyme
Location: 55279 - 56700 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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