Cluster: HRGMv2_0380_CGC45
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: HRGMv2_0380
- CGC Family ID: CGCFAM_00016
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0380_30 | HRGMv2_0380_30_8 | 5873 | 7183 | - | 2.A.35.1.5 |
| sulfatase | HRGMv2_0380_30 | HRGMv2_0380_30_9 | 7529 | 9481 | - | S1_48 |
| CAZyme | HRGMv2_0380_30 | HRGMv2_0380_30_10 | 9593 | 11539 | - | GH18 |
| pfam | HRGMv2_0380_30 | HRGMv2_0380_30_11 | 11641 | 12933 | - | BT_3987-like_N | Laminin_G_3 |
| pfam | HRGMv2_0380_30 | HRGMv2_0380_30_12 | 12942 | 13946 | - | GH18_BT1044-like |
| TC | HRGMv2_0380_30 | HRGMv2_0380_30_13 | 13986 | 15629 | - | 8.A.46.2.2 |
| TC | HRGMv2_0380_30 | HRGMv2_0380_30_14 | 15643 | 19017 | - | 1.B.14.6.13 |
Gene ID: HRGMv2_0380_30_8
Type: TC
Location: 5873 - 7183 (-)
Type: TC
Location: 5873 - 7183 (-)
Gene ID: HRGMv2_0380_30_9
Type: sulfatase
Location: 7529 - 9481 (-)
Type: sulfatase
Location: 7529 - 9481 (-)
Gene ID: HRGMv2_0380_30_10
Type: CAZyme
Location: 9593 - 11539 (-)
Type: CAZyme
Location: 9593 - 11539 (-)
Gene ID: HRGMv2_0380_30_11
Type: pfam
Location: 11641 - 12933 (-)
Type: pfam
Location: 11641 - 12933 (-)
Gene ID: HRGMv2_0380_30_12
Type: pfam
Location: 12942 - 13946 (-)
Type: pfam
Location: 12942 - 13946 (-)
Gene ID: HRGMv2_0380_30_13
Type: TC
Location: 13986 - 15629 (-)
Type: TC
Location: 13986 - 15629 (-)
Gene ID: HRGMv2_0380_30_14
Type: TC
Location: 15643 - 19017 (-)
Type: TC
Location: 15643 - 19017 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes megaguti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.