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Cluster: HRGMv2_0380_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0380_23 HRGMv2_0380_23_5 4423 5454 - GT9
pfam HRGMv2_0380_23 HRGMv2_0380_23_6 5438 6043 - DUF4254
CAZyme HRGMv2_0380_23 HRGMv2_0380_23_7 6119 7123 + GH73
NULL(UNKNOWN) HRGMv2_0380_23 HRGMv2_0380_23_8 7244 7930 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0380_23 HRGMv2_0380_23_9 7981 10143 + 8.A.51.1.1
pfam HRGMv2_0380_23 HRGMv2_0380_23_10 10140 10874 + DNA_binding_1
CAZyme HRGMv2_0380_23 HRGMv2_0380_23_11 10932 12485 - GT22
TC HRGMv2_0380_23 HRGMv2_0380_23_12 12635 14062 - 3.D.1.8.1
TC HRGMv2_0380_23 HRGMv2_0380_23_13 14070 15554 - 3.D.1.5.1
TC HRGMv2_0380_23 HRGMv2_0380_23_14 15567 17459 - 3.D.1.2.1
TC HRGMv2_0380_23 HRGMv2_0380_23_15 17479 17787 - 3.D.1.2.1
TC HRGMv2_0380_23 HRGMv2_0380_23_16 17801 18310 - 3.D.9.1.1
STP HRGMv2_0380_23 HRGMv2_0380_23_17 18314 18748 - Fer4 | Fer4
TC HRGMv2_0380_23 HRGMv2_0380_23_18 18751 19827 - 3.D.1.5.1
TC HRGMv2_0380_23 HRGMv2_0380_23_19 19845 21464 - 3.D.1.5.1
TC HRGMv2_0380_23 HRGMv2_0380_23_20 21454 22086 - 3.D.1.3.1
TC HRGMv2_0380_23 HRGMv2_0380_23_21 22107 22457 - 3.D.1.8.1
Gene ID: HRGMv2_0380_23_5
Type: CAZyme
Location: 4423 - 5454 (-)
Gene ID: HRGMv2_0380_23_6
Type: pfam
Location: 5438 - 6043 (-)
Gene ID: HRGMv2_0380_23_7
Type: CAZyme
Location: 6119 - 7123 (+)
Gene ID: HRGMv2_0380_23_8
Type:
Location: 7244 - 7930 (+)
Gene ID: HRGMv2_0380_23_9
Type: TC
Location: 7981 - 10143 (+)
Gene ID: HRGMv2_0380_23_10
Type: pfam
Location: 10140 - 10874 (+)
Gene ID: HRGMv2_0380_23_11
Type: CAZyme
Location: 10932 - 12485 (-)
Gene ID: HRGMv2_0380_23_12
Type: TC
Location: 12635 - 14062 (-)
Gene ID: HRGMv2_0380_23_13
Type: TC
Location: 14070 - 15554 (-)
Gene ID: HRGMv2_0380_23_14
Type: TC
Location: 15567 - 17459 (-)
Gene ID: HRGMv2_0380_23_15
Type: TC
Location: 17479 - 17787 (-)
Gene ID: HRGMv2_0380_23_16
Type: TC
Location: 17801 - 18310 (-)
Gene ID: HRGMv2_0380_23_17
Type: STP
Location: 18314 - 18748 (-)
Gene ID: HRGMv2_0380_23_18
Type: TC
Location: 18751 - 19827 (-)
Gene ID: HRGMv2_0380_23_19
Type: TC
Location: 19845 - 21464 (-)
Gene ID: HRGMv2_0380_23_20
Type: TC
Location: 21454 - 22086 (-)
Gene ID: HRGMv2_0380_23_21
Type: TC
Location: 22107 - 22457 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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