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Cluster: HRGMv2_0380_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0380_19 HRGMv2_0380_19_30 28226 29968 - GH110
NULL(UNKNOWN) HRGMv2_0380_19 HRGMv2_0380_19_31 29982 32042 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0380_19 HRGMv2_0380_19_32 32140 33084 - S09.B04
CAZyme HRGMv2_0380_19 HRGMv2_0380_19_33 33071 35008 - GH110
CAZyme HRGMv2_0380_19 HRGMv2_0380_19_34 34998 36866 - GH110
NULL(UNKNOWN) HRGMv2_0380_19 HRGMv2_0380_19_35 36863 38008 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0380_19 HRGMv2_0380_19_36 38037 39620 - 8.A.46.1.3
TC HRGMv2_0380_19 HRGMv2_0380_19_37 39634 42765 - 1.B.14.6.1
Gene ID: HRGMv2_0380_19_30
Type: CAZyme
Location: 28226 - 29968 (-)
Gene ID: HRGMv2_0380_19_31
Type:
Location: 29982 - 32042 (-)
Gene ID: HRGMv2_0380_19_32
Type: peptidase
Location: 32140 - 33084 (-)
Gene ID: HRGMv2_0380_19_33
Type: CAZyme
Location: 33071 - 35008 (-)
Gene ID: HRGMv2_0380_19_34
Type: CAZyme
Location: 34998 - 36866 (-)
Gene ID: HRGMv2_0380_19_35
Type:
Location: 36863 - 38008 (-)
Gene ID: HRGMv2_0380_19_36
Type: TC
Location: 38037 - 39620 (-)
Gene ID: HRGMv2_0380_19_37
Type: TC
Location: 39634 - 42765 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0380_19_36 vegan > omnivore 1.00051 0.01057

🧭 Explore Read Mapping of CGC

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