dbCAN Logo

Cluster: HRGMv2_0380_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0380_15 HRGMv2_0380_15_5 1866 3443 - GH20
sulfatase HRGMv2_0380_15 HRGMv2_0380_15_6 3440 4654 - S1_16
pfam HRGMv2_0380_15 HRGMv2_0380_15_7 4711 6855 - Fib_succ_major | SusE | SusE | SusE
CAZyme HRGMv2_0380_15 HRGMv2_0380_15_8 6871 8568 - GH136
pfam HRGMv2_0380_15 HRGMv2_0380_15_9 8594 9709 - Fib_succ_major
pfam HRGMv2_0380_15 HRGMv2_0380_15_10 9728 11338 - SusD_RagB | SusD-like_3
TC HRGMv2_0380_15 HRGMv2_0380_15_11 11351 14428 - 1.B.14.6.1
CAZyme HRGMv2_0380_15 HRGMv2_0380_15_12 14483 15595 - GH43_24
CAZyme HRGMv2_0380_15 HRGMv2_0380_15_13 15621 17483 - GH110
CAZyme HRGMv2_0380_15 HRGMv2_0380_15_14 17497 19362 - GH110
Gene ID: HRGMv2_0380_15_5
Type: CAZyme
Location: 1866 - 3443 (-)
Gene ID: HRGMv2_0380_15_6
Type: sulfatase
Location: 3440 - 4654 (-)
Gene ID: HRGMv2_0380_15_7
Type: pfam
Location: 4711 - 6855 (-)
Gene ID: HRGMv2_0380_15_8
Type: CAZyme
Location: 6871 - 8568 (-)
Gene ID: HRGMv2_0380_15_9
Type: pfam
Location: 8594 - 9709 (-)
Gene ID: HRGMv2_0380_15_10
Type: pfam
Location: 9728 - 11338 (-)
Gene ID: HRGMv2_0380_15_11
Type: TC
Location: 11351 - 14428 (-)
Gene ID: HRGMv2_0380_15_12
Type: CAZyme
Location: 14483 - 15595 (-)
Gene ID: HRGMv2_0380_15_13
Type: CAZyme
Location: 15621 - 17483 (-)
Gene ID: HRGMv2_0380_15_14
Type: CAZyme
Location: 17497 - 19362 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List