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Cluster: HRGMv2_0380_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0380_11 HRGMv2_0380_11_1 153 1397 - GH171
pfam HRGMv2_0380_11 HRGMv2_0380_11_2 1390 2502 - RF-1 | PCRF
pfam HRGMv2_0380_11 HRGMv2_0380_11_3 2524 3159 - Cytidylate_kin2
TC HRGMv2_0380_11 HRGMv2_0380_11_4 3166 4560 - 2.A.66.1.32
NULL(UNKNOWN) HRGMv2_0380_11 HRGMv2_0380_11_5 4929 5498 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0380_11 HRGMv2_0380_11_6 5515 6990 - tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C
TC HRGMv2_0380_11 HRGMv2_0380_11_7 7081 9042 + 1.I.1.1.3
pfam HRGMv2_0380_11 HRGMv2_0380_11_8 9071 12304 + TMEM260-like
TC HRGMv2_0380_11 HRGMv2_0380_11_9 12801 14471 - 4.C.1.1.14
Gene ID: HRGMv2_0380_11_1
Type: CAZyme
Location: 153 - 1397 (-)
Gene ID: HRGMv2_0380_11_2
Type: pfam
Location: 1390 - 2502 (-)
Gene ID: HRGMv2_0380_11_3
Type: pfam
Location: 2524 - 3159 (-)
Gene ID: HRGMv2_0380_11_4
Type: TC
Location: 3166 - 4560 (-)
Gene ID: HRGMv2_0380_11_5
Type:
Location: 4929 - 5498 (-)
Gene ID: HRGMv2_0380_11_6
Type: pfam
Location: 5515 - 6990 (-)
Gene ID: HRGMv2_0380_11_7
Type: TC
Location: 7081 - 9042 (+)
Gene ID: HRGMv2_0380_11_8
Type: pfam
Location: 9071 - 12304 (+)
Gene ID: HRGMv2_0380_11_9
Type: TC
Location: 12801 - 14471 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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