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Cluster: HRGMv2_0380_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0380_10 HRGMv2_0380_10_24 39812 40597 + 9.B.14.3.3
pfam HRGMv2_0380_10 HRGMv2_0380_10_25 40661 42022 + Cytochrom_C | CCP_MauG | Haem_bd
pfam HRGMv2_0380_10 HRGMv2_0380_10_26 42488 43447 + SAICAR_synt
CAZyme HRGMv2_0380_10 HRGMv2_0380_10_27 43704 46820 + GH2
CAZyme HRGMv2_0380_10 HRGMv2_0380_10_28 46981 49275 - GH20
sulfatase HRGMv2_0380_10 HRGMv2_0380_10_29 49280 50860 - S1_11
pfam HRGMv2_0380_10 HRGMv2_0380_10_30 50953 52203 - BT_3987-like_N | Laminin_G_3
CAZyme HRGMv2_0380_10 HRGMv2_0380_10_31 52217 53347 - GH18
TC HRGMv2_0380_10 HRGMv2_0380_10_32 53368 54951 - 8.A.46.2.1
TC HRGMv2_0380_10 HRGMv2_0380_10_33 54967 58269 - 1.B.14.6.13
Gene ID: HRGMv2_0380_10_24
Type: TC
Location: 39812 - 40597 (+)
Gene ID: HRGMv2_0380_10_25
Type: pfam
Location: 40661 - 42022 (+)
Gene ID: HRGMv2_0380_10_26
Type: pfam
Location: 42488 - 43447 (+)
Gene ID: HRGMv2_0380_10_27
Type: CAZyme
Location: 43704 - 46820 (+)
Gene ID: HRGMv2_0380_10_28
Type: CAZyme
Location: 46981 - 49275 (-)
Gene ID: HRGMv2_0380_10_29
Type: sulfatase
Location: 49280 - 50860 (-)
Gene ID: HRGMv2_0380_10_30
Type: pfam
Location: 50953 - 52203 (-)
Gene ID: HRGMv2_0380_10_31
Type: CAZyme
Location: 52217 - 53347 (-)
Gene ID: HRGMv2_0380_10_32
Type: TC
Location: 53368 - 54951 (-)
Gene ID: HRGMv2_0380_10_33
Type: TC
Location: 54967 - 58269 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0380_10_32 vegan > omnivore 2.46828 0.01057
HRGMv2_0380_10_32 vegetarian > omnivore 1.36599 0.03795
HRGMv2_0380_10_33 vegan > omnivore 1.88541 0.01057
HRGMv2_0380_10_33 vegetarian > omnivore 1.17887 0.03795

🧭 Explore Read Mapping of CGC

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