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Cluster: HRGMv2_0380_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0380_8 HRGMv2_0380_8_58 70716 71699 + GT2
TC HRGMv2_0380_8 HRGMv2_0380_8_59 71887 75189 + 3.A.5.1.1
pfam HRGMv2_0380_8 HRGMv2_0380_8_60 75476 75925 + dCMP_cyt_deam_1 | MafB19-deam
pfam HRGMv2_0380_8 HRGMv2_0380_8_61 75994 76734 + adh_short | KR | adh_short_C2
TC HRGMv2_0380_8 HRGMv2_0380_8_62 76735 78288 + 9.B.33.1.1
pfam HRGMv2_0380_8 HRGMv2_0380_8_63 78416 81049 + DUF4953 | DUF5117 | DUF5118
TC HRGMv2_0380_8 HRGMv2_0380_8_64 81204 84593 + 1.B.14.6.1
Gene ID: HRGMv2_0380_8_58
Type: CAZyme
Location: 70716 - 71699 (+)
Gene ID: HRGMv2_0380_8_59
Type: TC
Location: 71887 - 75189 (+)
Gene ID: HRGMv2_0380_8_60
Type: pfam
Location: 75476 - 75925 (+)
Gene ID: HRGMv2_0380_8_61
Type: pfam
Location: 75994 - 76734 (+)
Gene ID: HRGMv2_0380_8_62
Type: TC
Location: 76735 - 78288 (+)
Gene ID: HRGMv2_0380_8_63
Type: pfam
Location: 78416 - 81049 (+)
Gene ID: HRGMv2_0380_8_64
Type: TC
Location: 81204 - 84593 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0380_8_61 vegetarian > omnivore 1.04797 0.02038

🧭 Explore Read Mapping of CGC

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