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Cluster: HRGMv2_0380_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0380_5 HRGMv2_0380_5_80 97294 99561 - GH92
CAZyme HRGMv2_0380_5 HRGMv2_0380_5_81 99574 103161 - GH125 | GH92
CAZyme HRGMv2_0380_5 HRGMv2_0380_5_82 103158 105416 - GH92
CAZyme HRGMv2_0380_5 HRGMv2_0380_5_83 105416 106423 - GH130_2
TC HRGMv2_0380_5 HRGMv2_0380_5_84 106688 107554 - 3.A.2.1.5
TC HRGMv2_0380_5 HRGMv2_0380_5_85 107559 109148 - 3.A.2.1.2
pfam HRGMv2_0380_5 HRGMv2_0380_5_86 109151 109708 - OSCP
pfam HRGMv2_0380_5 HRGMv2_0380_5_87 109693 110211 - ATP-synt_B
TC HRGMv2_0380_5 HRGMv2_0380_5_88 110233 110448 - 3.A.2.1.6
TC HRGMv2_0380_5 HRGMv2_0380_5_89 110501 111580 - 3.A.2.1.7
pfam HRGMv2_0380_5 HRGMv2_0380_5_90 111577 111852 - ATP-synt_DE_N
TC HRGMv2_0380_5 HRGMv2_0380_5_91 111876 113396 - 3.A.2.1.2
Gene ID: HRGMv2_0380_5_80
Type: CAZyme
Location: 97294 - 99561 (-)
Gene ID: HRGMv2_0380_5_81
Type: CAZyme
Location: 99574 - 103161 (-)
Gene ID: HRGMv2_0380_5_82
Type: CAZyme
Location: 103158 - 105416 (-)
Gene ID: HRGMv2_0380_5_83
Type: CAZyme
Location: 105416 - 106423 (-)
Gene ID: HRGMv2_0380_5_84
Type: TC
Location: 106688 - 107554 (-)
Gene ID: HRGMv2_0380_5_85
Type: TC
Location: 107559 - 109148 (-)
Gene ID: HRGMv2_0380_5_86
Type: pfam
Location: 109151 - 109708 (-)
Gene ID: HRGMv2_0380_5_87
Type: pfam
Location: 109693 - 110211 (-)
Gene ID: HRGMv2_0380_5_88
Type: TC
Location: 110233 - 110448 (-)
Gene ID: HRGMv2_0380_5_89
Type: TC
Location: 110501 - 111580 (-)
Gene ID: HRGMv2_0380_5_90
Type: pfam
Location: 111577 - 111852 (-)
Gene ID: HRGMv2_0380_5_91
Type: TC
Location: 111876 - 113396 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0380_5_88 vegetarian > omnivore 1.92981 0.03795
HRGMv2_0380_5_91 vegan > omnivore 1.03644 0.01057

🧭 Explore Read Mapping of CGC

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