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Cluster: HRGMv2_0380_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0380_4 HRGMv2_0380_4_105 104888 105868 - 3.A.16.1.1
pfam HRGMv2_0380_4 HRGMv2_0380_4_106 105918 106673 + Metallophos
CAZyme HRGMv2_0380_4 HRGMv2_0380_4_107 106673 107752 + GT1
pfam HRGMv2_0380_4 HRGMv2_0380_4_108 107762 109816 + PP_kinase | PP_kinase_N | PP_kinase_C | PLDc_2 | PLDc_2 | PP_kinase_C_1
pfam HRGMv2_0380_4 HRGMv2_0380_4_109 109816 110718 + Ppx-GppA
CAZyme HRGMv2_0380_4 HRGMv2_0380_4_110 111005 113056 + GH20
TC HRGMv2_0380_4 HRGMv2_0380_4_111 113194 114420 - 2.A.119.1.2
Gene ID: HRGMv2_0380_4_105
Type: TC
Location: 104888 - 105868 (-)
Gene ID: HRGMv2_0380_4_106
Type: pfam
Location: 105918 - 106673 (+)
Gene ID: HRGMv2_0380_4_107
Type: CAZyme
Location: 106673 - 107752 (+)
Gene ID: HRGMv2_0380_4_108
Type: pfam
Location: 107762 - 109816 (+)
Gene ID: HRGMv2_0380_4_109
Type: pfam
Location: 109816 - 110718 (+)
Gene ID: HRGMv2_0380_4_110
Type: CAZyme
Location: 111005 - 113056 (+)
Gene ID: HRGMv2_0380_4_111
Type: TC
Location: 113194 - 114420 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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