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Cluster: HRGMv2_0380_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0380_4 HRGMv2_0380_4_82 68434 70020 - 8.A.46.2.2
TC HRGMv2_0380_4 HRGMv2_0380_4_83 70033 73122 - 1.B.14.6.13
CAZyme HRGMv2_0380_4 HRGMv2_0380_4_84 73364 75238 - GH29
CAZyme HRGMv2_0380_4 HRGMv2_0380_4_85 75235 78414 - GH2
CAZyme HRGMv2_0380_4 HRGMv2_0380_4_86 78411 80573 - GH92
CAZyme HRGMv2_0380_4 HRGMv2_0380_4_87 80579 82900 - GH3
CAZyme HRGMv2_0380_4 HRGMv2_0380_4_88 83706 85970 + GH20
NULL(UNKNOWN) HRGMv2_0380_4 HRGMv2_0380_4_89 86112 87077 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0380_4 HRGMv2_0380_4_90 87074 87649 - OEP
TC HRGMv2_0380_4 HRGMv2_0380_4_91 88224 88829 - 2.A.6.1.5
TC HRGMv2_0380_4 HRGMv2_0380_4_92 88790 90121 - 2.A.6.1.2
Gene ID: HRGMv2_0380_4_82
Type: TC
Location: 68434 - 70020 (-)
Gene ID: HRGMv2_0380_4_83
Type: TC
Location: 70033 - 73122 (-)
Gene ID: HRGMv2_0380_4_84
Type: CAZyme
Location: 73364 - 75238 (-)
Gene ID: HRGMv2_0380_4_85
Type: CAZyme
Location: 75235 - 78414 (-)
Gene ID: HRGMv2_0380_4_86
Type: CAZyme
Location: 78411 - 80573 (-)
Gene ID: HRGMv2_0380_4_87
Type: CAZyme
Location: 80579 - 82900 (-)
Gene ID: HRGMv2_0380_4_88
Type: CAZyme
Location: 83706 - 85970 (+)
Gene ID: HRGMv2_0380_4_89
Type:
Location: 86112 - 87077 (+)
Gene ID: HRGMv2_0380_4_90
Type: pfam
Location: 87074 - 87649 (-)
Gene ID: HRGMv2_0380_4_91
Type: TC
Location: 88224 - 88829 (-)
Gene ID: HRGMv2_0380_4_92
Type: TC
Location: 88790 - 90121 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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