Cluster: HRGMv2_0378_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_2 | HRGMv2_0378_2_84 | 103463 | 104551 | + | GH117 | GH117 |
| pfam | HRGMv2_0378_2 | HRGMv2_0378_2_85 | 104676 | 105935 | + | Pentapeptide | Pentapeptide_3 |
| pfam | HRGMv2_0378_2 | HRGMv2_0378_2_86 | 105919 | 106605 | + | AlkZ-rel |
| CAZyme | HRGMv2_0378_2 | HRGMv2_0378_2_87 | 106790 | 108334 | + | GH29 |
| TC | HRGMv2_0378_2 | HRGMv2_0378_2_88 | 108417 | 108803 | + | 2.A.7.1.5 |
Gene ID: HRGMv2_0378_2_84
Type: CAZyme
Location: 103463 - 104551 (+)
Type: CAZyme
Location: 103463 - 104551 (+)
Gene ID: HRGMv2_0378_2_85
Type: pfam
Location: 104676 - 105935 (+)
Type: pfam
Location: 104676 - 105935 (+)
Gene ID: HRGMv2_0378_2_86
Type: pfam
Location: 105919 - 106605 (+)
Type: pfam
Location: 105919 - 106605 (+)
Gene ID: HRGMv2_0378_2_87
Type: CAZyme
Location: 106790 - 108334 (+)
Type: CAZyme
Location: 106790 - 108334 (+)
Gene ID: HRGMv2_0378_2_88
Type: TC
Location: 108417 - 108803 (+)
Type: TC
Location: 108417 - 108803 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.