Cluster: HRGMv2_0378_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_1 | HRGMv2_0378_1_227 | 293454 | 294383 | - | GT14 |
| TC | HRGMv2_0378_1 | HRGMv2_0378_1_228 | 294380 | 295855 | - | 2.A.66.2.6 |
| CAZyme | HRGMv2_0378_1 | HRGMv2_0378_1_229 | 296077 | 298518 | + | CBM91 | GH43_19 | GH43_9 |
| CAZyme | HRGMv2_0378_1 | HRGMv2_0378_1_230 | 298688 | 300487 | + | GH31_4 |
| pfam | HRGMv2_0378_1 | HRGMv2_0378_1_231 | 300548 | 301189 | + | DUF5110 | Glyco_hydro_31_3rd |
| NULL(UNKNOWN) | HRGMv2_0378_1 | HRGMv2_0378_1_232 | 301536 | 302105 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0378_1 | HRGMv2_0378_1_233 | 302123 | 303094 | - | 8.A.5.1.3 |
Gene ID: HRGMv2_0378_1_227
Type: CAZyme
Location: 293454 - 294383 (-)
Type: CAZyme
Location: 293454 - 294383 (-)
Gene ID: HRGMv2_0378_1_228
Type: TC
Location: 294380 - 295855 (-)
Type: TC
Location: 294380 - 295855 (-)
Gene ID: HRGMv2_0378_1_229
Type: CAZyme
Location: 296077 - 298518 (+)
Type: CAZyme
Location: 296077 - 298518 (+)
Gene ID: HRGMv2_0378_1_230
Type: CAZyme
Location: 298688 - 300487 (+)
Type: CAZyme
Location: 298688 - 300487 (+)
Gene ID: HRGMv2_0378_1_231
Type: pfam
Location: 300548 - 301189 (+)
Type: pfam
Location: 300548 - 301189 (+)
Gene ID: HRGMv2_0378_1_232
Type:
Location: 301536 - 302105 (-)
Type:
Location: 301536 - 302105 (-)
Gene ID: HRGMv2_0378_1_233
Type: TC
Location: 302123 - 303094 (-)
Type: TC
Location: 302123 - 303094 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.