Cluster: HRGMv2_0378_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- CGC Family ID: CGCFAM_00080
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_1 | HRGMv2_0378_1_212 | 271867 | 272508 | - | CE4 |
| pfam | HRGMv2_0378_1 | HRGMv2_0378_1_213 | 272508 | 275945 | - | TMEM260-like |
| TC | HRGMv2_0378_1 | HRGMv2_0378_1_214 | 276076 | 277530 | - | 2.A.38.1.3 |
Gene ID: HRGMv2_0378_1_212
Type: CAZyme
Location: 271867 - 272508 (-)
Type: CAZyme
Location: 271867 - 272508 (-)
Gene ID: HRGMv2_0378_1_213
Type: pfam
Location: 272508 - 275945 (-)
Type: pfam
Location: 272508 - 275945 (-)
Gene ID: HRGMv2_0378_1_214
Type: TC
Location: 276076 - 277530 (-)
Type: TC
Location: 276076 - 277530 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.