Cluster: HRGMv2_0378_CGC54
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_59 | HRGMv2_0378_59_8 | 5887 | 7308 | - | 9.B.196.1.2 |
| pfam | HRGMv2_0378_59 | HRGMv2_0378_59_9 | 7396 | 8034 | + | DUF3256 |
| CAZyme | HRGMv2_0378_59 | HRGMv2_0378_59_10 | 8139 | 10043 | + | GH29 |
Gene ID: HRGMv2_0378_59_8
Type: TC
Location: 5887 - 7308 (-)
Type: TC
Location: 5887 - 7308 (-)
Gene ID: HRGMv2_0378_59_9
Type: pfam
Location: 7396 - 8034 (+)
Type: pfam
Location: 7396 - 8034 (+)
Gene ID: HRGMv2_0378_59_10
Type: CAZyme
Location: 8139 - 10043 (+)
Type: CAZyme
Location: 8139 - 10043 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.