Cluster: HRGMv2_0378_CGC50
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_46 | HRGMv2_0378_46_2 | 1026 | 1850 | + | GH25 |
| pfam | HRGMv2_0378_46 | HRGMv2_0378_46_3 | 2045 | 2752 | + | AmiA-like |
| STP | HRGMv2_0378_46 | HRGMv2_0378_46_4 | 2988 | 5042 | - | HATPase_c |
| TC | HRGMv2_0378_46 | HRGMv2_0378_46_5 | 5251 | 7812 | - | 3.A.9.1.2 |
| pfam | HRGMv2_0378_46 | HRGMv2_0378_46_6 | 8087 | 8845 | - | Pro_isomerase | Pro_isomerase |
| CAZyme | HRGMv2_0378_46 | HRGMv2_0378_46_7 | 9004 | 11271 | - | GH95 |
Gene ID: HRGMv2_0378_46_2
Type: CAZyme
Location: 1026 - 1850 (+)
Type: CAZyme
Location: 1026 - 1850 (+)
Gene ID: HRGMv2_0378_46_3
Type: pfam
Location: 2045 - 2752 (+)
Type: pfam
Location: 2045 - 2752 (+)
Gene ID: HRGMv2_0378_46_4
Type: STP
Location: 2988 - 5042 (-)
Type: STP
Location: 2988 - 5042 (-)
Gene ID: HRGMv2_0378_46_5
Type: TC
Location: 5251 - 7812 (-)
Type: TC
Location: 5251 - 7812 (-)
Gene ID: HRGMv2_0378_46_6
Type: pfam
Location: 8087 - 8845 (-)
Type: pfam
Location: 8087 - 8845 (-)
Gene ID: HRGMv2_0378_46_7
Type: CAZyme
Location: 9004 - 11271 (-)
Type: CAZyme
Location: 9004 - 11271 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.