Cluster: HRGMv2_0378_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- CGC Family ID: CGCFAM_09638
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_1 | HRGMv2_0378_1_166 | 213627 | 215234 | + | 9.B.174.1.1 |
| pfam | HRGMv2_0378_1 | HRGMv2_0378_1_167 | 215261 | 215680 | + | YbeY |
| CAZyme | HRGMv2_0378_1 | HRGMv2_0378_1_168 | 215836 | 216612 | - | GT2 |
| CAZyme | HRGMv2_0378_1 | HRGMv2_0378_1_169 | 216623 | 217921 | - | GT4 |
Gene ID: HRGMv2_0378_1_166
Type: TC
Location: 213627 - 215234 (+)
Type: TC
Location: 213627 - 215234 (+)
Gene ID: HRGMv2_0378_1_167
Type: pfam
Location: 215261 - 215680 (+)
Type: pfam
Location: 215261 - 215680 (+)
Gene ID: HRGMv2_0378_1_168
Type: CAZyme
Location: 215836 - 216612 (-)
Type: CAZyme
Location: 215836 - 216612 (-)
Gene ID: HRGMv2_0378_1_169
Type: CAZyme
Location: 216623 - 217921 (-)
Type: CAZyme
Location: 216623 - 217921 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.