Cluster: HRGMv2_0378_CGC49
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_44 | HRGMv2_0378_44_1 | 511 | 3885 | - | GH146 |
| NULL(UNKNOWN) | HRGMv2_0378_44 | HRGMv2_0378_44_2 | 4004 | 4132 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0378_44 | HRGMv2_0378_44_3 | 4232 | 8290 | + | CBM32 | GH2 |
| CAZyme | HRGMv2_0378_44 | HRGMv2_0378_44_4 | 8413 | 11931 | + | GH106 |
| TC | HRGMv2_0378_44 | HRGMv2_0378_44_5 | 12044 | 13498 | - | 2.A.35.1.6 |
| pfam | HRGMv2_0378_44 | HRGMv2_0378_44_6 | 13703 | 15322 | - | PseudoU_synth_2 |
| TC | HRGMv2_0378_44 | HRGMv2_0378_44_7 | 15441 | 18362 | - | 1.B.42.1.8 |
| STP | HRGMv2_0378_44 | HRGMv2_0378_44_8 | 18434 | 18970 | - | HD |
| TC | HRGMv2_0378_44 | HRGMv2_0378_44_9 | 19077 | 19973 | + | 1.A.23.4.1 |
| STP | HRGMv2_0378_44 | HRGMv2_0378_44_10 | 20058 | 20855 | - | Fer4 |
| CAZyme | HRGMv2_0378_44 | HRGMv2_0378_44_11 | 20912 | 22804 | - | PL11_1 |
Gene ID: HRGMv2_0378_44_1
Type: CAZyme
Location: 511 - 3885 (-)
Type: CAZyme
Location: 511 - 3885 (-)
Gene ID: HRGMv2_0378_44_2
Type:
Location: 4004 - 4132 (+)
Type:
Location: 4004 - 4132 (+)
Gene ID: HRGMv2_0378_44_3
Type: CAZyme
Location: 4232 - 8290 (+)
Type: CAZyme
Location: 4232 - 8290 (+)
Gene ID: HRGMv2_0378_44_4
Type: CAZyme
Location: 8413 - 11931 (+)
Type: CAZyme
Location: 8413 - 11931 (+)
Gene ID: HRGMv2_0378_44_5
Type: TC
Location: 12044 - 13498 (-)
Type: TC
Location: 12044 - 13498 (-)
Gene ID: HRGMv2_0378_44_6
Type: pfam
Location: 13703 - 15322 (-)
Type: pfam
Location: 13703 - 15322 (-)
Gene ID: HRGMv2_0378_44_7
Type: TC
Location: 15441 - 18362 (-)
Type: TC
Location: 15441 - 18362 (-)
Gene ID: HRGMv2_0378_44_8
Type: STP
Location: 18434 - 18970 (-)
Type: STP
Location: 18434 - 18970 (-)
Gene ID: HRGMv2_0378_44_9
Type: TC
Location: 19077 - 19973 (+)
Type: TC
Location: 19077 - 19973 (+)
Gene ID: HRGMv2_0378_44_10
Type: STP
Location: 20058 - 20855 (-)
Type: STP
Location: 20058 - 20855 (-)
Gene ID: HRGMv2_0378_44_11
Type: CAZyme
Location: 20912 - 22804 (-)
Type: CAZyme
Location: 20912 - 22804 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.