Cluster: HRGMv2_0378_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_41 | HRGMv2_0378_41_15 | 16826 | 18184 | + | CE20 |
| pfam | HRGMv2_0378_41 | HRGMv2_0378_41_16 | 18250 | 20601 | + | CBM_4_9 |
| pfam | HRGMv2_0378_41 | HRGMv2_0378_41_17 | 20801 | 21463 | + | UDG |
| TC | HRGMv2_0378_41 | HRGMv2_0378_41_18 | 21504 | 22562 | + | 2.A.98.1.3 |
Gene ID: HRGMv2_0378_41_15
Type: CAZyme
Location: 16826 - 18184 (+)
Type: CAZyme
Location: 16826 - 18184 (+)
Gene ID: HRGMv2_0378_41_16
Type: pfam
Location: 18250 - 20601 (+)
Type: pfam
Location: 18250 - 20601 (+)
Gene ID: HRGMv2_0378_41_17
Type: pfam
Location: 20801 - 21463 (+)
Type: pfam
Location: 20801 - 21463 (+)
Gene ID: HRGMv2_0378_41_18
Type: TC
Location: 21504 - 22562 (+)
Type: TC
Location: 21504 - 22562 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.