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Cluster: HRGMv2_0378_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0378_37 HRGMv2_0378_37_5 4845 5828 + GT2
CAZyme HRGMv2_0378_37 HRGMv2_0378_37_6 5832 7091 + GT4
pfam HRGMv2_0378_37 HRGMv2_0378_37_7 7081 7692 + Hexapep | Hexapep_2 | Hexapep_2
pfam HRGMv2_0378_37 HRGMv2_0378_37_8 7689 8717 + Acyl_transf_3
CAZyme HRGMv2_0378_37 HRGMv2_0378_37_9 8714 9646 + GT8
TC HRGMv2_0378_37 HRGMv2_0378_37_10 9643 10650 + 9.B.97.1.9
CAZyme HRGMv2_0378_37 HRGMv2_0378_37_11 10659 11492 + GT2
pfam HRGMv2_0378_37 HRGMv2_0378_37_12 11505 12695 + Glycos_transf_1 | Glyco_trans_1_2 | Glyco_trans_1_4
CAZyme HRGMv2_0378_37 HRGMv2_0378_37_13 12692 13795 + GT4
CAZyme HRGMv2_0378_37 HRGMv2_0378_37_14 13792 14943 + GT4
Gene ID: HRGMv2_0378_37_5
Type: CAZyme
Location: 4845 - 5828 (+)
Gene ID: HRGMv2_0378_37_6
Type: CAZyme
Location: 5832 - 7091 (+)
Gene ID: HRGMv2_0378_37_7
Type: pfam
Location: 7081 - 7692 (+)
Gene ID: HRGMv2_0378_37_8
Type: pfam
Location: 7689 - 8717 (+)
Gene ID: HRGMv2_0378_37_9
Type: CAZyme
Location: 8714 - 9646 (+)
Gene ID: HRGMv2_0378_37_10
Type: TC
Location: 9643 - 10650 (+)
Gene ID: HRGMv2_0378_37_11
Type: CAZyme
Location: 10659 - 11492 (+)
Gene ID: HRGMv2_0378_37_12
Type: pfam
Location: 11505 - 12695 (+)
Gene ID: HRGMv2_0378_37_13
Type: CAZyme
Location: 12692 - 13795 (+)
Gene ID: HRGMv2_0378_37_14
Type: CAZyme
Location: 13792 - 14943 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
43-108
→
Species
43-108 sp001915545

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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