Cluster: HRGMv2_0378_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_27 | HRGMv2_0378_27_32 | 40968 | 42236 | + | 9.B.146.1.3 |
| pfam | HRGMv2_0378_27 | HRGMv2_0378_27_33 | 42301 | 43632 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_0378_27 | HRGMv2_0378_27_34 | 43645 | 44940 | + | 2.A.103.1.1 |
| CAZyme | HRGMv2_0378_27 | HRGMv2_0378_27_35 | 45006 | 46139 | + | GT28 |
Gene ID: HRGMv2_0378_27_32
Type: TC
Location: 40968 - 42236 (+)
Type: TC
Location: 40968 - 42236 (+)
Gene ID: HRGMv2_0378_27_33
Type: pfam
Location: 42301 - 43632 (+)
Type: pfam
Location: 42301 - 43632 (+)
Gene ID: HRGMv2_0378_27_34
Type: TC
Location: 43645 - 44940 (+)
Type: TC
Location: 43645 - 44940 (+)
Gene ID: HRGMv2_0378_27_35
Type: CAZyme
Location: 45006 - 46139 (+)
Type: CAZyme
Location: 45006 - 46139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.