Cluster: HRGMv2_0378_CGC38
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- CGC Family ID: CGCFAM_00715
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_26 | HRGMv2_0378_26_10 | 13150 | 14841 | + | GH29 |
| pfam | HRGMv2_0378_26 | HRGMv2_0378_26_11 | 15248 | 15736 | + | CarboxypepD_reg | CarbopepD_reg_2 |
| TC | HRGMv2_0378_26 | HRGMv2_0378_26_12 | 15706 | 17640 | + | 1.B.14.3.6 |
Gene ID: HRGMv2_0378_26_10
Type: CAZyme
Location: 13150 - 14841 (+)
Type: CAZyme
Location: 13150 - 14841 (+)
Gene ID: HRGMv2_0378_26_11
Type: pfam
Location: 15248 - 15736 (+)
Type: pfam
Location: 15248 - 15736 (+)
Gene ID: HRGMv2_0378_26_12
Type: TC
Location: 15706 - 17640 (+)
Type: TC
Location: 15706 - 17640 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.