Cluster: HRGMv2_0378_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_20 | HRGMv2_0378_20_35 | 48446 | 49303 | + | 3.A.1.7.1 |
| TC | HRGMv2_0378_20 | HRGMv2_0378_20_36 | 49319 | 50188 | + | 3.A.1.7.1 |
| TC | HRGMv2_0378_20 | HRGMv2_0378_20_37 | 50176 | 50946 | + | 3.A.1.7.2 |
| CAZyme | HRGMv2_0378_20 | HRGMv2_0378_20_38 | 51104 | 52531 | - | GH105 |
| pfam | HRGMv2_0378_20 | HRGMv2_0378_20_39 | 53003 | 53536 | + | OMP_b-brl |
| TC | HRGMv2_0378_20 | HRGMv2_0378_20_40 | 53877 | 55277 | + | 2.A.25.1.5 |
Gene ID: HRGMv2_0378_20_35
Type: TC
Location: 48446 - 49303 (+)
Type: TC
Location: 48446 - 49303 (+)
Gene ID: HRGMv2_0378_20_36
Type: TC
Location: 49319 - 50188 (+)
Type: TC
Location: 49319 - 50188 (+)
Gene ID: HRGMv2_0378_20_37
Type: TC
Location: 50176 - 50946 (+)
Type: TC
Location: 50176 - 50946 (+)
Gene ID: HRGMv2_0378_20_38
Type: CAZyme
Location: 51104 - 52531 (-)
Type: CAZyme
Location: 51104 - 52531 (-)
Gene ID: HRGMv2_0378_20_39
Type: pfam
Location: 53003 - 53536 (+)
Type: pfam
Location: 53003 - 53536 (+)
Gene ID: HRGMv2_0378_20_40
Type: TC
Location: 53877 - 55277 (+)
Type: TC
Location: 53877 - 55277 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.