Cluster: HRGMv2_0378_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_19 | HRGMv2_0378_19_47 | 48466 | 49533 | - | 8.A.1.1.2 |
| pfam | HRGMv2_0378_19 | HRGMv2_0378_19_48 | 49598 | 50926 | - | OEP | OEP |
| TF | HRGMv2_0378_19 | HRGMv2_0378_19_49 | 50907 | 51353 | - | MarR |
| CAZyme | HRGMv2_0378_19 | HRGMv2_0378_19_50 | 51751 | 53520 | + | GH29 |
| NULL(UNKNOWN) | HRGMv2_0378_19 | HRGMv2_0378_19_51 | 53484 | 53696 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0378_19 | HRGMv2_0378_19_52 | 53665 | 55926 | - | 1.B.14.2.2 |
Gene ID: HRGMv2_0378_19_47
Type: TC
Location: 48466 - 49533 (-)
Type: TC
Location: 48466 - 49533 (-)
Gene ID: HRGMv2_0378_19_48
Type: pfam
Location: 49598 - 50926 (-)
Type: pfam
Location: 49598 - 50926 (-)
Gene ID: HRGMv2_0378_19_49
Type: TF
Location: 50907 - 51353 (-)
Type: TF
Location: 50907 - 51353 (-)
Gene ID: HRGMv2_0378_19_50
Type: CAZyme
Location: 51751 - 53520 (+)
Type: CAZyme
Location: 51751 - 53520 (+)
Gene ID: HRGMv2_0378_19_51
Type:
Location: 53484 - 53696 (-)
Type:
Location: 53484 - 53696 (-)
Gene ID: HRGMv2_0378_19_52
Type: TC
Location: 53665 - 55926 (-)
Type: TC
Location: 53665 - 55926 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.