Cluster: HRGMv2_0378_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_19 | HRGMv2_0378_19_29 | 25825 | 26916 | + | 3.A.1.13.2 |
| pfam | HRGMv2_0378_19 | HRGMv2_0378_19_30 | 26957 | 27868 | + | CbiK |
| CAZyme | HRGMv2_0378_19 | HRGMv2_0378_19_31 | 28359 | 30305 | - | GH97 |
| CAZyme | HRGMv2_0378_19 | HRGMv2_0378_19_32 | 30684 | 32306 | + | GH29 |
| pfam | HRGMv2_0378_19 | HRGMv2_0378_19_33 | 32404 | 33288 | - | NTP_transferase | NTP_transf_3 |
| TC | HRGMv2_0378_19 | HRGMv2_0378_19_34 | 33518 | 34600 | - | 9.B.125.2.2 |
Gene ID: HRGMv2_0378_19_29
Type: TC
Location: 25825 - 26916 (+)
Type: TC
Location: 25825 - 26916 (+)
Gene ID: HRGMv2_0378_19_30
Type: pfam
Location: 26957 - 27868 (+)
Type: pfam
Location: 26957 - 27868 (+)
Gene ID: HRGMv2_0378_19_31
Type: CAZyme
Location: 28359 - 30305 (-)
Type: CAZyme
Location: 28359 - 30305 (-)
Gene ID: HRGMv2_0378_19_32
Type: CAZyme
Location: 30684 - 32306 (+)
Type: CAZyme
Location: 30684 - 32306 (+)
Gene ID: HRGMv2_0378_19_33
Type: pfam
Location: 32404 - 33288 (-)
Type: pfam
Location: 32404 - 33288 (-)
Gene ID: HRGMv2_0378_19_34
Type: TC
Location: 33518 - 34600 (-)
Type: TC
Location: 33518 - 34600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.