Cluster: HRGMv2_0378_CGC32
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_17 | HRGMv2_0378_17_32 | 39652 | 41976 | - | 1.B.14.1.4 |
| pfam | HRGMv2_0378_17 | HRGMv2_0378_17_33 | 42784 | 43542 | + | Methyltransf_4 | Methyltransf_25 |
| TC | HRGMv2_0378_17 | HRGMv2_0378_17_34 | 43595 | 44695 | + | 3.A.1.132.3 |
| NULL(UNKNOWN) | HRGMv2_0378_17 | HRGMv2_0378_17_35 | 44830 | 45111 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0378_17 | HRGMv2_0378_17_36 | 45165 | 48359 | - | 2.A.6.3.6 |
| TC | HRGMv2_0378_17 | HRGMv2_0378_17_37 | 48415 | 49428 | - | 2.A.6.3.8 |
| pfam | HRGMv2_0378_17 | HRGMv2_0378_17_38 | 49523 | 50872 | - | OEP | OEP |
| STP | HRGMv2_0378_17 | HRGMv2_0378_17_39 | 50885 | 51526 | - | TetR_N |
| CAZyme | HRGMv2_0378_17 | HRGMv2_0378_17_40 | 52049 | 55114 | + | CBM32 | GH105 |
| pfam | HRGMv2_0378_17 | HRGMv2_0378_17_41 | 55479 | 56663 | + | WG_beta_rep | WG_beta_rep |
| TC | HRGMv2_0378_17 | HRGMv2_0378_17_42 | 56852 | 57496 | + | 2.A.115.2.8 |
| CAZyme | HRGMv2_0378_17 | HRGMv2_0378_17_43 | 57705 | 58682 | - | GT2 |
Gene ID: HRGMv2_0378_17_32
Type: TC
Location: 39652 - 41976 (-)
Type: TC
Location: 39652 - 41976 (-)
Gene ID: HRGMv2_0378_17_33
Type: pfam
Location: 42784 - 43542 (+)
Type: pfam
Location: 42784 - 43542 (+)
Gene ID: HRGMv2_0378_17_34
Type: TC
Location: 43595 - 44695 (+)
Type: TC
Location: 43595 - 44695 (+)
Gene ID: HRGMv2_0378_17_35
Type:
Location: 44830 - 45111 (-)
Type:
Location: 44830 - 45111 (-)
Gene ID: HRGMv2_0378_17_36
Type: TC
Location: 45165 - 48359 (-)
Type: TC
Location: 45165 - 48359 (-)
Gene ID: HRGMv2_0378_17_37
Type: TC
Location: 48415 - 49428 (-)
Type: TC
Location: 48415 - 49428 (-)
Gene ID: HRGMv2_0378_17_38
Type: pfam
Location: 49523 - 50872 (-)
Type: pfam
Location: 49523 - 50872 (-)
Gene ID: HRGMv2_0378_17_39
Type: STP
Location: 50885 - 51526 (-)
Type: STP
Location: 50885 - 51526 (-)
Gene ID: HRGMv2_0378_17_40
Type: CAZyme
Location: 52049 - 55114 (+)
Type: CAZyme
Location: 52049 - 55114 (+)
Gene ID: HRGMv2_0378_17_41
Type: pfam
Location: 55479 - 56663 (+)
Type: pfam
Location: 55479 - 56663 (+)
Gene ID: HRGMv2_0378_17_42
Type: TC
Location: 56852 - 57496 (+)
Type: TC
Location: 56852 - 57496 (+)
Gene ID: HRGMv2_0378_17_43
Type: CAZyme
Location: 57705 - 58682 (-)
Type: CAZyme
Location: 57705 - 58682 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.