Cluster: HRGMv2_0378_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- CGC Family ID: CGCFAM_02125
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_16 | HRGMv2_0378_16_12 | 17529 | 18203 | + | 3.A.1.122.2 |
| NULL(UNKNOWN) | HRGMv2_0378_16 | HRGMv2_0378_16_13 | 18724 | 19860 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0378_16 | HRGMv2_0378_16_14 | 20486 | 21337 | + | Glycos_transf_2 |
| CAZyme | HRGMv2_0378_16 | HRGMv2_0378_16_15 | 21309 | 22295 | + | GT2 |
Gene ID: HRGMv2_0378_16_12
Type: TC
Location: 17529 - 18203 (+)
Type: TC
Location: 17529 - 18203 (+)
Gene ID: HRGMv2_0378_16_13
Type:
Location: 18724 - 19860 (+)
Type:
Location: 18724 - 19860 (+)
Gene ID: HRGMv2_0378_16_14
Type: pfam
Location: 20486 - 21337 (+)
Type: pfam
Location: 20486 - 21337 (+)
Gene ID: HRGMv2_0378_16_15
Type: CAZyme
Location: 21309 - 22295 (+)
Type: CAZyme
Location: 21309 - 22295 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.