Cluster: HRGMv2_0378_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_14 | HRGMv2_0378_14_21 | 20153 | 21346 | + | 2.A.1.2.97 |
| CAZyme | HRGMv2_0378_14 | HRGMv2_0378_14_22 | 21527 | 22525 | + | GH43_17 |
| CAZyme | HRGMv2_0378_14 | HRGMv2_0378_14_23 | 22563 | 24512 | + | GH136 |
| pfam | HRGMv2_0378_14 | HRGMv2_0378_14_24 | 24517 | 24780 | + | DUF2007 |
| TC | HRGMv2_0378_14 | HRGMv2_0378_14_25 | 24898 | 26262 | + | 2.A.1.3.17 |
Gene ID: HRGMv2_0378_14_21
Type: TC
Location: 20153 - 21346 (+)
Type: TC
Location: 20153 - 21346 (+)
Gene ID: HRGMv2_0378_14_22
Type: CAZyme
Location: 21527 - 22525 (+)
Type: CAZyme
Location: 21527 - 22525 (+)
Gene ID: HRGMv2_0378_14_23
Type: CAZyme
Location: 22563 - 24512 (+)
Type: CAZyme
Location: 22563 - 24512 (+)
Gene ID: HRGMv2_0378_14_24
Type: pfam
Location: 24517 - 24780 (+)
Type: pfam
Location: 24517 - 24780 (+)
Gene ID: HRGMv2_0378_14_25
Type: TC
Location: 24898 - 26262 (+)
Type: TC
Location: 24898 - 26262 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.