Cluster: HRGMv2_0378_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_1 | HRGMv2_0378_1_118 | 159602 | 159838 | - | 3.D.1.6.3 |
| sulfatase | HRGMv2_0378_1 | HRGMv2_0378_1_119 | 160043 | 161851 | - | S1_97 |
| pfam | HRGMv2_0378_1 | HRGMv2_0378_1_120 | 162050 | 162319 | + | Ribosomal_S15 |
| CAZyme | HRGMv2_0378_1 | HRGMv2_0378_1_121 | 162473 | 163924 | - | CBM32 | GH43_24 |
| pfam | HRGMv2_0378_1 | HRGMv2_0378_1_122 | 164026 | 166083 | - | tRNA-synt_1 | tRNA_bind | Anticodon_1 | tRNA-synt_1g | Anticodon_3 |
| pfam | HRGMv2_0378_1 | HRGMv2_0378_1_123 | 166179 | 167123 | - | Lip_A_acyltrans |
| CAZyme | HRGMv2_0378_1 | HRGMv2_0378_1_124 | 167219 | 168250 | - | GT9 |
Gene ID: HRGMv2_0378_1_118
Type: TC
Location: 159602 - 159838 (-)
Type: TC
Location: 159602 - 159838 (-)
Gene ID: HRGMv2_0378_1_119
Type: sulfatase
Location: 160043 - 161851 (-)
Type: sulfatase
Location: 160043 - 161851 (-)
Gene ID: HRGMv2_0378_1_120
Type: pfam
Location: 162050 - 162319 (+)
Type: pfam
Location: 162050 - 162319 (+)
Gene ID: HRGMv2_0378_1_121
Type: CAZyme
Location: 162473 - 163924 (-)
Type: CAZyme
Location: 162473 - 163924 (-)
Gene ID: HRGMv2_0378_1_122
Type: pfam
Location: 164026 - 166083 (-)
Type: pfam
Location: 164026 - 166083 (-)
Gene ID: HRGMv2_0378_1_123
Type: pfam
Location: 166179 - 167123 (-)
Type: pfam
Location: 166179 - 167123 (-)
Gene ID: HRGMv2_0378_1_124
Type: CAZyme
Location: 167219 - 168250 (-)
Type: CAZyme
Location: 167219 - 168250 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.