Cluster: HRGMv2_0378_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_12 | HRGMv2_0378_12_2 | 635 | 1315 | + | 9.B.120.1.2 |
| pfam | HRGMv2_0378_12 | HRGMv2_0378_12_3 | 1323 | 3353 | - | PIF1 | TPR_8 | TPR_8 | AAA_19 | AAA_22 | TPR_16 | TPR_16 | AAA_30 | TPR_19 |
| CAZyme | HRGMv2_0378_12 | HRGMv2_0378_12_4 | 3444 | 5864 | - | GT51 |
Gene ID: HRGMv2_0378_12_2
Type: TC
Location: 635 - 1315 (+)
Type: TC
Location: 635 - 1315 (+)
Gene ID: HRGMv2_0378_12_3
Type: pfam
Location: 1323 - 3353 (-)
Type: pfam
Location: 1323 - 3353 (-)
Gene ID: HRGMv2_0378_12_4
Type: CAZyme
Location: 3444 - 5864 (-)
Type: CAZyme
Location: 3444 - 5864 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.