Cluster: HRGMv2_0378_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_11 | HRGMv2_0378_11_7 | 11233 | 12288 | - | 9.B.97.1.2 |
| CAZyme | HRGMv2_0378_11 | HRGMv2_0378_11_8 | 12405 | 15563 | - | GH2 |
| pfam | HRGMv2_0378_11 | HRGMv2_0378_11_9 | 15771 | 19010 | - | DUF6055 |
| CAZyme | HRGMv2_0378_11 | HRGMv2_0378_11_10 | 19262 | 21694 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_0378_11 | HRGMv2_0378_11_11 | 21827 | 23599 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0378_11 | HRGMv2_0378_11_12 | 23615 | 25861 | - | 1.B.14.6.8 |
Gene ID: HRGMv2_0378_11_7
Type: TC
Location: 11233 - 12288 (-)
Type: TC
Location: 11233 - 12288 (-)
Gene ID: HRGMv2_0378_11_8
Type: CAZyme
Location: 12405 - 15563 (-)
Type: CAZyme
Location: 12405 - 15563 (-)
Gene ID: HRGMv2_0378_11_9
Type: pfam
Location: 15771 - 19010 (-)
Type: pfam
Location: 15771 - 19010 (-)
Gene ID: HRGMv2_0378_11_10
Type: CAZyme
Location: 19262 - 21694 (-)
Type: CAZyme
Location: 19262 - 21694 (-)
Gene ID: HRGMv2_0378_11_11
Type:
Location: 21827 - 23599 (-)
Type:
Location: 21827 - 23599 (-)
Gene ID: HRGMv2_0378_11_12
Type: TC
Location: 23615 - 25861 (-)
Type: TC
Location: 23615 - 25861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.